Words similar to hydrophobicity
Example sentences for: hydrophobicity
How can you use “hydrophobicity” in a sentence? Here are some example sentences to help you improve your vocabulary:
Indeed, a correlation between EC50 values and quantum mechanics simulations strongly suggests the existence of a cation-pi interaction between a triptophan residue of the ligand binding pocket and the quaternary ammonium of acetylcholine [ 9 ] . A series of grid representations of the ligand binding pocket was generated that accounted for Van der Waals shape, electrostatic potential, as well as hydrogen bonding and hydrophobicity profiles.
We also eliminated 3 Pfam-A and 20 Pfam-B families, as they did not contain multiple hydrophobic regions in their hydrophobicity plots.
Although no single amino acid is absolutely invariant in all TPRs, they do contain a largely conserved pattern of amino acid similarity in terms of size, hydrophobicity, and spacing [ 8 9 ] . Eight amino acid residues are critically placed on the same face of their respective helices: 4, 8, and 11 on the first helix, and 20, 24, and 27 on the second [ 8 9 ] . As shown in Fig.
Much of our earlier understanding on protein-ligand interactions is based on the steric factors, electrostatic contributions, hydrophobicity, hydrogen-bond donor or acceptor capability.
CASP4 demonstrated further improvement in our methodologies in both comparative modelling and ab initio prediction [ 26 ] . Our approaches combine a Monte Carlo procedure, simulated annealing, genetic algorithms, graph theory, and semi-exhaustive searches with move sets consisting of fragments and discrete state models, and scoring functions consisting of all atom-based pairwise functions, hydrophobicity indices, secondary structure preferences, and hydrogen bonding.
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