Example sentences for: hydrophobicity

How can you use “hydrophobicity” in a sentence? Here are some example sentences to help you improve your vocabulary:

  • Indeed, a correlation between EC50 values and quantum mechanics simulations strongly suggests the existence of a cation-pi interaction between a triptophan residue of the ligand binding pocket and the quaternary ammonium of acetylcholine [ 9 ] . A series of grid representations of the ligand binding pocket was generated that accounted for Van der Waals shape, electrostatic potential, as well as hydrogen bonding and hydrophobicity profiles.

  • This sequence feature can be identified in primary sequences using hydrophobicity scales [ 7, 8, 9].

  • The flexible ligand was docked into a combination of five potential map representations of the RAR-α ligand binding pocket, which account for two Van der Waals boundaries, hydrophobicity, electrostatics and hydrogen bonding profiles [ 20, 27].

  • We also eliminated 3 Pfam-A and 20 Pfam-B families, as they did not contain multiple hydrophobic regions in their hydrophobicity plots.

  • For all the families, we counted the occurrences of amino acids in the consensus sequences and in all aligned sequences in hydrophobic regions, which are defined to have no fewer than 10 continuous amino acids with GES hydrophobicity value greater than 0.


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