Words similar to halobacterium
Example sentences for: halobacterium
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To test if this association was specific for Synechocystis sp., we repeated the analyses replacing Synechocystis sp. with Bacillus subtilis . The result was qualitatively the same: at the p > .99 level 53 QuartOPs supported grouping Bacillus subtilis with Halobacterium sp., and only 27 supported grouping Aquifex aeolicus with Halobacterium sp. (Fig.
Distribution of ORFs among COG categories for complete genomes of Halobacterium sp. and Archaeoglobus fulgidus
The latter were assumed to be infrequently transferred, but recent analyses reported them to be horizontally transferred among bacterial lineages [ 10 11 ] . The initiation factor IF-2 in Halobacterium sp. was previously shown to have strong similarity to the initiation factor IF-2 from Bacteria [ 49 ] . Most of the genes that group Halobacterium with the mesophilic bacteria encode functions that were postulated to be frequently exchanged [ 50 ] . While no meta-category appears exempt from HGT, some functions appear to be more often transferred than others (cf.
We selected eight genomes from archaea: Archaeoglobus fulgidus (AF), Aeropyrum pernix K1 (AP), Halobacterium sp. (HS), Methanococcus jannaschii (MJ), Methanobacterium thermoautotrophicum (MT), Pyrococcus abyssi (PA), Pyrococcus horikoshii (PH), and Thermoplasma acidophilum (TA); 14 genomes from bacteria: Aquifex aeolicus (AA), Borrelia burgdorferi (BB), Bacillus subtilis (BS), Chlamydia pneumoniae strain AR39 (CP), Chlamydia trachomatis (CT), E. coli strain K12 (EC), Haemophilus influenzae (HI), Helicobacter pylori strain 26695 (HP), Mycobacterium tuberculosis (MyTu), Mycoplasma genitalium (MG), Mycoplasma pneumoniae (MP), Rickettsia prowazekii (RP), Synechocystis sp. (SS), and Treponema pallidum (TP); four genomes from eukaryotes: Saccharomyces cerevisiae (SC), D. melanogaster (DM), C. elegans (CE), and Arabidopsis thaliana (AT).
The number of QuartOPs identified per genome quartet ranges from 82 (for genome quartet #6: Deinococcus radiodurans, Treponema pallidum, Escherichia coli, and Halobacterium sp .) to 1182 (for genome quartet #63: Agrobacterium tumifaciens, Sinorhizobium meliloti, Mezorhizobium loti and Caulobacter crescentus ).
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