Words similar to glycines
Example sentences for: glycines
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Meloidogyne extracellular mappings (15 clusters) were all within the category of SCP/Tpx-1/Ag5/PR-1/Sc7 extracellular proteins (InterPro domain IPR001283) and showed homology to the genes vap-1 from H. glycines and Mi-msp-1 from M. incognita [ 40 41 ] , both venom allergen antigen 5 family members with homologs in numerous nematodes including hookworms and C. elegans [ 42 ] . Categories that particularly contributed to the abundance of ligand-binding/carrier mappings for Meloidogyne included EF-hand calcium binding (22 clusters), RNA recognition motif (18 clusters), and a variety of ATP-binding domains (20 clusters).
In addition, families of these proteins tend to have GxxxG and GxxxxxxG instead of related motifs that have one or both glycines changed to alanine or serine.
Included are 32,735 sequences from Meloidogyne species ( M. incognita 12,752, M. hapla 11,049, M. javanica 5,600, M. arenaria 3,334), as well as ESTs from cyst nematode species ( G. rostochiensis 5,934, H. glycines 4,327, G. pallida 1,832), and the lesion nematode ( P. penetrans 2,048).
MI00244.cl, for example, had homology to 47 ESTs in our collection from other Tylenchida species including root-knot nematodes M. javanica, M. hapla and M. arenaria , cyst nematodes H. glycines and G. rostochiensis , and the lesion nematode Pratylenchus penetrans with E-values from 7e-78 to 3e-05.
A cluster of amino acids at the C-terminus that is rich in basic residues and glycines forms a potential nuclear localization signal [ 25 26 ] in the human as well as the mouse protein (Figure 2).
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