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Example sentences for: fastgroup

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Comparison of FastGroup with ClustalX output
Testing of FastGroup
The FastGroup 8 contain sequences that differ from FastGroup 1 by a one bp gap, which explains the reason that ClustalX placed these sequences in Clade 1. Because this gap occurred in all four FastGroup 8 sequences, and not in any of the FastGroup 1 sequences, these two groups probably represent different 16S rDNAs and possibly two bacterial species.
With a large data set, it may be desirable to speed up the FastGroup analysis, possibly by using only part of the input sequence during grouping.
FastGroup can also speed up alignment analysis by rapidly trimming, dereplicating, and outputting sequences to the fasta_groups.txt file, which is ideal for Clustal X alignments.