Words similar to elicitation
Example sentences for: elicitation
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After cloning and DNA sequencing, the KRC-selected sequence datasets were analyzed by the computer program Multiple Expectation Maximum for Motif Elicitation (MEME version 3.0) to generate sets of position specific scoring matrices (PSSMs) or motifs [ 30 ] . When the program was set to identify wider sequences (= 9 nucleotides) the PSSMs were homologous to Sb [ 29 ] , the κB motif [ 31 ] , and the canonical heptamer and nonamer elements of the RSS [ 32 ] . However, shortening the width of the motifs to 5 nucleotides, the target length for the C 2 H 2 zinc finger pairs of the tramtrack [ 33 ] , the ZAS-N dataset yielded two motifs, "GGTAT" and "T(T/C)TT(T/G)G" and the ZAS-C dataset yielded a single motif, "TGTGG".
This result indicates that priming of these mice with G7 peptides is required for the elicitation of the allergic response.
The fifty-three KRC/ZAS-N-selected sequences (ZAS-N dataset) and 49 KRC/ZAS-C-selected sequences (ZAS-C dataset) were first analyzed by the Motif Expectation Maximum for Motif Elicitation (MEME) computer program.
Sequence analysis of surrogate peptide binders to HCV using MEME (Motif Elicitation Program) and other peptide sequence alignment programs identified a consensus sequence TxRLL found in four peptides binding to the HCV mRNA (Figure 5).
In subsequent steps, motifs identified by sequence alignment programs like MEME (Multiple EM for Motif Elicitation), http://meme.sdsc.edu/meme/website/intro.htmlcan also be used to search the available databases using MAST (Motif Alignment and Search Tool, http://meme.sdsc.edu/mem/website/mast-intro.html).
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