Words similar to carbonyl
Example sentences for: carbonyl
How can you use “carbonyl” in a sentence? Here are some example sentences to help you improve your vocabulary:
Lhcb6, a minor LHCP, contains Gly instead of Pro at the position analogous to 82 in Lhcb1, thus eliminating the peptide bond carbonyl of Gly as a ligand, but Lhcb6 has a potential ligand for Chl b in Gln83 [ 39 40 ] . These two LHCP sub-species, along with Lhca4 are most affected by the lack of Chl b in vivo [ 5 ] . Lhcb4 (apoprotein of CP29) has Val instead of Pro at 'position 82', and the absence of site a 6 in Lhcb4 may contribute to its drastic reduction in Chl b -less mutants [ 5 8 ] . However, Lhcb2, Lhcb3, Lhca1, Lhca2 and Lhca3 contain the Gly peptide carbonyl as a ligand (each has Pro at 'position 82' [ 40 ] ) but are reduced only slightly, if any, in amount by the lack of Chl b.
Alternatively, these Chls may coordinate with peptide carbonyl groups.
Efforts to solve the crystal structure of one of the metallo-β-lactamases with a bound substrate molecule have failed, most likely due to the high activity of the enzymes towards all β-lactam containing antibiotics [ 37 54 ] . Therefore, computational studies have been used extensively to study substrate binding, the role of the Zn(II) ions in catalysis, the protonation state of the active site, and inhibitor binding [ 37 42 55 56 57 58 59 ] . All of the substrate binding models have made assumptions before the substrate was docked into the active site [ 37 42 ] , and some of these assumptions have been shown to be invalid for certain substrates [ 43 ] . With L1, two key assumptions were made: (1) the bridging hydroxide functions as the nucleophile during catalysis and (2) Zn 1 coordinates the β-lactam carbonyl [ 37 ] . With these assumptions and after energy minimizations, Ser224 was predicted to hydrogen bond to the substrate carboxylate [ 37 ] , reminiscent of the role predicted for Lys224 in CcrA [ 42 ] . Ullah et al.
Hibert et al proposed an early model for the antagonist pharmacophore of the 5-HT 3 R [ 18 ] . According to this model, all 5-HT 3 R antagonists contain an aromatic ring, a carbonyl oxygen or bioisosteric equivalent, and a basic nitrogen.
Taxol includes ten polar functionalities: five 3-atom units (four esters, one amide) and five 1- or 2-atom units (three OHs, one ether, one C9 carbonyl).
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