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Example sentences for: caenorhabditis
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Data from the following species were assembled into presumptive orthology groups (hereafter, proteins) and aligned [ 36 ] : Aquifex aeolicus , Bacillus subtilis , Borrelia burgdorferi , Chlamydia trachomatis , Escherichia coli , Haemophilus influenzae , Helicobacter pylori, Mycobacterium tuberculosis, Mycoplasma genitalium, Mycoplasma pneumoniae , Rickettsia prowazekii, Synechocystis sp., and Treponema pallidum (Eubacteria), Archaeoglobus fulgidus, Methanobacterium thermoautotrophicum, Methanococcus jannaschii, Pyrococcus abyssi , and P. horikoshii (Archaebacteria: Euryarchaeota), and Arabidopsis thaliana, Caenorhabditis elegans, Dictyostelium discoideum, Drosophila melanogaster, Gallus gallus, Homo sapiens, Mus musculus, Oryza saticva, Plasmodium falciparum, Saccharomyces cerevisiae, Schizosaccharomyces pombe, Trypanosoma sp. , and Xenopus laevis (Eukaryota).
Brugia, Meloidogyne and Caenorhabditis represent three separate major nematode clades (III, IV and V, respectively) [ 53 ] . Possible explanations for the discrepancy in matches are that the Brugia clusters contain a large fraction of non-coding sequences (that is, 5' and 3' UTR, unspliced introns) or have undergone more rapid molecular evolution and diversification.
Non-vertebrate orthologs of ATF-2, in Drosophila, Caenorhabditis elegans and yeasts, lack the zinc finger.
Antisense RNAs transcribed from loci distinct from their putative targets, such as lin-4 of Caenorhabditis elegans , are generally short and have the potential to form imperfect duplexes with complementary regions of their sense counterparts [ 3].
Database searches of genomic sequences from Saccharomyces cerevisiae (yeast), Caenorhabditis elegans (roundworm), and Strongylocentrotus purpuratus (sea urchin) did not reveal genes encoding the TOX HMG signature sequence (data not shown).
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