Words similar to archaeoglobus
Example sentences for: archaeoglobus
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Figure 2cexamines the response of codons to GC content across individual genes within sample genomes representing all three domains of life: eukaryotes ( Drosophila ), bacteria ( Synechocystis ), and archaea ( Archaeoglobus ). The codon frequency in individual genes seems to be predictable on the basis of the overall GC content of the coding sequences: the relative GC content of individual codons explains about half the variance in response in their absolute frequencies within each coding sequence (that is, the presence or absence of a particular codon depends on the extent to which alternative synonyms of more 'suitable' GC content exist).
Neisseria meningitidis (Neime), Pasteurella multocida (Pasmu), Psudomonas aeruginosa (Pseae), Rickettsia prowazekii (Ricpr), Staphyloccocus aureus (Staau), Streptococcus pyogenes (Strpy), Synechocystis PCC6803 (SynPC), Thermotoga maritima (Thema), Treponema pallidum (Trepa), Ureaplasma urealyticum (Ureur), Vibrio cholerae (Vibch), Xylella fastidiosa (Xylfa), and ten archaea: Aeropyrum pernix (Aerpe), Archaeoglobus fulgidus (Arcfu), Halobacterium sp. (Halsp), Methanobacterium thermoautotrophicum (Metth), Methanococcus jannaschii (Metja), Pyrococcus horikoshii (Pyrho), Pyrococcus abyssi (Pyrab), Sulfolobus solfataricus (Sulso), Thermoplasma acidophilum (Theac), Thermoplasma volcanium (Thevo).
Often translational coupling exists, as seen in Figure 7for P. furiosus, P. abyssi, M. thermoautotrophicum, T. volcanium, Archaeoglobus fulgidus and T. maritima.
However, in contrast to sequences present in those Archaea that do possess TrpEb_1 (for example, Archaeoglobus, species of Pyrococcus, Methanococcus, Methanobacterium, Methanosarcina and Halobacterium ), the six archaeal lineages that possess only TrpEb_2 have very distinctive elongated branches on the TrpEa tree (Figure 4).
Gratifyingly, many more QuartOPs supported the grouping of the thermophilic archaeon Archaeoglobus with the thermophilic bacteria Aquifex and Thermotoga . The different interdomain genome quartets that include a meso- or thermophilic archaeon are summarized in Table 3.
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