Example sentences for: annotations

How can you use “annotations” in a sentence? Here are some example sentences to help you improve your vocabulary:

  • Sequence retrieval was initiated via BLASTN searches (default parameters- [ 37 ] ) against the BDGP http://www.fruitfly.organd GenBank http://www.ncbi.nlm.nih.govdatabases using LTRs from previously identified Drosophila retroelements as queries [ 15 ] . Results with E-values < e -10were annotated on the corresponding clone, whereupon visual inspection of several annotations confirmed the presence of retroelements proximal to known genes.

  • To improve the extent and consistency of human curation, a small group of expert FlyBase curators visually inspected each gene in the entire euchromatic sequence, using defined rules to integrate computational analyses, cDNA data and protein alignments into updated annotations.

  • To determine the gene neighborhood of each L1, the header for each chromosomal contig GenBank flatfile (the *.gbs files are available in the individual chromosome files at [ 55]) was collected and scanned for mRNA or CDS annotations.

  • Subtree-neighbors can be useful if there is (partial) agreement among their annotations (for example: if the subtree-neighbors of a query are NAD +-dependent isocitrate dehydrogenase and NADP +-dependent isocitrate dehydrogenase we can suppose that the query is likely to be a isocitrate dehydrogenase, but it is not possible to determine whether it is dependent on NAD +or NADP +).

  • Gene splits/merges were defined as changes involving more than one gene in both Release 2 and 3. While not common, splits/merges are interesting in that they involve simultaneous restructuring of multiple Release 2 annotations.


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