Words similar to annotations
Example sentences for: annotations
How can you use “annotations” in a sentence? Here are some example sentences to help you improve your vocabulary:
The secondary structures of the proteins, α-helical, and coiled-coil regions were analyzed using DNASTAR PROTEAN software and the coiled-coil regions were confirmed with the MultiCoil algorithm [ 2 ] . Coiled-coil proteins from Arabidopsis were identified by searching the lists of complete-genome ORF annotations ftp://ftp.arabidopsis.org/home/tair/Genes/ORF_annotationsfor the keywords "myosin" (40 hits) and "coiled-coil" (0 hits).
The RIO output for the A. thaliana protein F12M16_14 analyzed against the ldh domain alignment is shown as an example in Figure 7. The results are summarized in Tables 2and 3. Complete RIO output files (as well as NHX [ 33 ] tree files) are avaliable, herefor A. thaliana and at herefor c.elegans . In all cases, distinction between malate dehydrogenase (NAD) and lactate dehydrogenase is unquestionable and in accordance with existing annotations and BLAST results irrespective which domain (ldh or ldh_C) was used for the RIO analysis (which implies that no domain swapping occurred over long evolutionary times).
The extent of each transcript and corresponding CDS was extracted from the ' Drosophila Genomic Sequence Annotations' file (in GFF format [ 87]), which is available [ 75].
Database cross-references provided by ENSMART cover a broad spectrum of functional annotations pertaining to gene- and protein-specific attributes as well as disease and cross-species attributes.
The same approach was used to generate the mRNA and CDS densities along the length of each chromosome; if multiple, mildly variable annotations were assigned to the same gene name, the first annotation listed in the GenBank flatfile header was used as the definitive location.
Loading...