Words similar to aflp

Example sentences for: aflp

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AFLP - amplified fragment length polymorphism; RFLP - restriction fragment length polymorphism; RAPD - random amplified polymorphic DNA; SSR - simple sequence repeat.
The genomes of the 11 Bacillus isolates selected for study were found by AFLP analysis to vary in relatedness to B. anthracis . Isolates with Jaccard distances of less than 0.55 formed a distinct cluster with all of the B. anthracis isolates (P.J.
In the present study, B. cereus and B. thuringiensis isolates that vary in AFLP-based genomic relatedness to B. anthracis were examined for the presence of DNA sequence similar to pXO2, to determine whether portions of this plasmid are conserved in closely related Bacillus isolates, and to determine whether the conservation of pXO2 sequences correlated with genomic relatedness established by AFLP comparisons [ 17 18 ] .
Approximately 200 ng of the pre-amplified AFLP fragments (length range from 100 bp - 600 bp) were added to a single reaction mixture containing 4.2 × SSC (Saline-Sodium Citrate, pH 7.0), 0.07% SDS (sodium dodecyl sulfate), and 10 pmol biotinylated probe.
The presence of pXO2 ORF sequences in 11 Bacillus isolates did not correlate with their genomic relatedness to B. anthracis as determined by AFLP comparisons.