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Example sentences for: affymetrix

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This shortening was also demonstrated by differential loss of signal from probe sets further away from the 3' end of the RNA, as shown with the Affymetrix control probe sets (Tables 1and 6), and by the progressive loss in probe sets detected as a function of their distance from the 3' end (Figure 4).
Simply put, we determine a threshold separating specific from non-specific hybridization assuming that the former usually results in stronger signals than the latter [ 18 ] . A similar approach has been reported for Affymetrix GeneChip arrays, so called 'LUT based scoring system' [ 8 ] (tables to check noise level of particular chips or noise filtering look up tables).
A zip file (Additional data file 1) containing the R package SAG for retrieval, preparation and analysis of data from the Affymetrix GeneChip and the R script (Additional data file 2) are available with the online version of this article.
The principal parameter for gene expression data stemming from a typical Affymetrix experiment is the average difference intensity (ADI), which is a representation of the absolute expression of a gene.
Data files were generated from scanned array images in the Affymetrix Microarray Suite Version 4.0 program.