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Example sentences for: aeolicus
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Bacteria: Aae, Aquifex aeolicus; Bap, Buchnera aphidicola; Bbu, Borrelia burgdorferi; Bsu, Bacillus subtilis; Bhal, Bacillus halodurans; Cje, Campylobacter jejuni; Cpn, Chlamydophila pneumoniae; Ctr, Chlamydia trachomatis; Dra, Deinococcus radiodurans; Eco, Escherichia coli; Hin, Haemophilus influenzae; Hpy, Helicobacter pylori; Mge, Mycoplasma genitalium; Mpn, Mycoplasma pneumoniae; Mtu, Mycobacterium tuberculosis; Nme, Neisseria meningitidis; Pae, Pseudomonas aeruginosa; Rpr, Rickettsia prowazekii; Syn, Synechocystis sp.; Tma, Thermotoga maritima; Tpa, Treponema pallidum; Vch, Vibrio cholerae; Xfa, Xylella fastidiosa . Eukaryote: Sce, Saccharomyces cerevisiae . Archaea: Ape, Aeropyrum pernix; Afu, Archaeoglobus fulgidus; Hbs, Halobacterium sp.; Mja, Methanococcus jannaschii; Mth, Methanobacterium thermoautotrophicum; Pho, Pyrococcus horikoshii; Pab, Pyrococcus abyssi; Tac, Thermoplasma acidophilum .
A PSI-BLAST search started with the N-terminal SBHM from the Aquifex aeolicus DDRP β' subunit detected several SBHMs from proteins other than the β' subunit, such as acetylornithine deacetylase (E = 2 × 10 -7, iteration 2), the C-terminal region of bacterial cytochrome F (E = 10 -4, iteration 2), biotin carboxyl carrier domain of biotin transcarboxylases (E = 6 × 10 -4, iteration 2) and the phosphotransferase system enzyme II (E = 10 -3, iteration 2).
To test if this association was specific for Synechocystis sp., we repeated the analyses replacing Synechocystis sp. with Bacillus subtilis . The result was qualitatively the same: at the p > .99 level 53 QuartOPs supported grouping Bacillus subtilis with Halobacterium sp., and only 27 supported grouping Aquifex aeolicus with Halobacterium sp. (Fig.
Other discrepancies are placement of the three Streptococcus sequences (Low GC Gram-positive Bacteria) with the Actinobacteria and the placement of Aquifex aeolicus (basal in the 16S rRNA-defined bacterial clade) and F. nucleatum within the Low GC Gram-positives (Figures 2and 3).
However, A. aeolicus is known to have exchanged numerous genes with other microorganisms [ 35 ] , and the phylogeny of its arsenate reductase gene might represent another example of this.