Words similar to aeolicus
Example sentences for: aeolicus
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We selected eight genomes from archaea: Archaeoglobus fulgidus (AF), Aeropyrum pernix K1 (AP), Halobacterium sp. (HS), Methanococcus jannaschii (MJ), Methanobacterium thermoautotrophicum (MT), Pyrococcus abyssi (PA), Pyrococcus horikoshii (PH), and Thermoplasma acidophilum (TA); 14 genomes from bacteria: Aquifex aeolicus (AA), Borrelia burgdorferi (BB), Bacillus subtilis (BS), Chlamydia pneumoniae strain AR39 (CP), Chlamydia trachomatis (CT), E. coli strain K12 (EC), Haemophilus influenzae (HI), Helicobacter pylori strain 26695 (HP), Mycobacterium tuberculosis (MyTu), Mycoplasma genitalium (MG), Mycoplasma pneumoniae (MP), Rickettsia prowazekii (RP), Synechocystis sp. (SS), and Treponema pallidum (TP); four genomes from eukaryotes: Saccharomyces cerevisiae (SC), D. melanogaster (DM), C. elegans (CE), and Arabidopsis thaliana (AT).
The bacterial side of this tree consists of three major clades: i) proteobacterial clade that, in addition to bona fide Proteobacteria, includes also A. aeolicus, M. tuberculosis, D. radiodurans, and Synechocystis sp, ii) Gram-positive clade that additionally includes T. maritima, and iii) an unexpected clade that unites spirochetes and chlamydia.
In addition to the spirochetes-chlamydia clade, the following non-trivial affinities were detected with strong bootstrap support: i) a cluster of the two hyperthemophiles, A. aeolicus and T. maritima, ii) a cluster including D. radiodurans, Synechocystis, and M. tuberculosis, which, at a deeper level, joined the Gram-positive bacterial branch (Fig.
One noteworthy finding was that in the genome quartet including Synechocystis sp., Halobacterium sp., Aquifex aeolicus and Thermotoga maritima the grouping of
The two free-living bacteria with small genomes, the hyperthermophiles A. aeolicus and T. maritima, did not join either the free-living or the parasitic bacterial cluster, despite their small number of genes similar to that in bacterial parasites (Fig.
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