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Example sentences for: aeolicus
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The sequences of the proteins encoded in complete genomes were extracted from the Genome division of the Entrez retrieval system [ 34 ] . The analyzed genomes included those of 30 bacteria: Aquifex aeolicus (Aquae), Bacillus halodurans (Bacha), Bacillus subtilis (Bacsu), Borrelia burgdorferi (Borbu), Buchnera sp. (Bucsp), Campylobacter jejunii (Camje), Caulobacter crescentus (Caucr), Chlamydia trachomatis (Chltr), Chlamydophila pneumoniae (Chlpn), Deinococcus radiodurans (Deira), Escherichia coli (Escco), Haemophilus influenzae (Haein), Helicobacter pylori (Helpy), Lactococcus lactis (Lacla), Mesorhizobium loti (Meslo), Mycoplasma genitalium (Mycge), Mycoplasma pneumoniae (Mycpn), Mycobacterium tuberculosis (Myctu),
The bacterial side of this tree consists of three major clades: i) proteobacterial clade that, in addition to bona fide Proteobacteria, includes also A. aeolicus, M. tuberculosis, D. radiodurans, and Synechocystis sp, ii) Gram-positive clade that additionally includes T. maritima, and iii) an unexpected clade that unites spirochetes and chlamydia.
In addition to the spirochetes-chlamydia clade, the following non-trivial affinities were detected with strong bootstrap support: i) a cluster of the two hyperthemophiles, A. aeolicus and T. maritima, ii) a cluster including D. radiodurans, Synechocystis, and M. tuberculosis, which, at a deeper level, joined the Gram-positive bacterial branch (Fig.
i) bacteria with large genomes, namely E. coli, B. subtilis, Synechocystis sp., Deinococcus radiodurans and Mycobacterium tuberculosis, and free-living bacteria with small genomes, A. aeolicus and T. maritima
The two free-living bacteria with small genomes, the hyperthermophiles A. aeolicus and T. maritima, did not join either the free-living or the parasitic bacterial cluster, despite their small number of genes similar to that in bacterial parasites (Fig.
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