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Example sentences for: orfs

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These types of analyses can also characterize intron-exon boundaries, splice variants, tissue specific expression levels, and gene homologies [ 16 ] . Furthermore, clustering ESTs together to form a contiguous sequence can predict putative open reading frame (ORFs).
Many of the deleted Release 2 annotations represent ORFs that overlap transposable elements.
Within the low-GC block, trpR is separated by four ORFs from genes encoding the two subunits of anthranilate synthase ( trpAa and trpAb ). These probably do not function for general tryptophan biosynthesis since paralogs of these genes, which exhibit a phylogenetically congruent context of gene organization, exist elsewhere in the genome (Figure 6).
Along with the genes for the translation machinery a number of genes involved in various steps of RNA synthesis and processing were located among the 'trophozoite genes', including 16 ORFs belonging to various RNA polymerase complexes and 11 splicing factors (Figure 5).
PCR assays to detect each of the 47 individual pXO2 ORFs were conducted using DNA from each bacterial isolate (Table 1) as template.